PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0005s01260.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 454aa    MW: 50669.1 Da    PI: 6.2014
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0005s01260.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.3e-10167207343
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                       + k  rr+++NReAA++sR+RKka++++Le+   +L +  +
  Vang0005s01260.1 167 DQKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVKLVQLEQ 207
                       56889*************************86655555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7157211No hitNo description
SMARTSM003381.0E-7165234IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117167211IPR004827Basic-leucine zipper domain
PfamPF001701.5E-7168208IPR004827Basic-leucine zipper domain
CDDcd147081.42E-21169221No hitNo description
SuperFamilySSF579592.46E-6169212No hitNo description
PROSITE patternPS000360172187IPR004827Basic-leucine zipper domain
PfamPF141441.5E-24252325IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    Send to blast
MKETSNGEEI EMVIEQGNDG NRNPTTGFCD LGDLHHSSAV FHQEAGVDLG SSSMFSVKSS  60
NVVGDSNMQY GTLSTNVGSS QIGSSGGGCM DTGLQLMYHK GVSMQTLPLG NGHVDNWADS  120
GIVDNSQQTD DTSTDIDTDD RIQCNRVKNG SRMLMQSKDQ TKVKPEDQKT LRRLAQNREA  180
AKKSRLRKKA YVQQLENSRV KLVQLEQELQ RARQQGILIG TEGNQGHLAV GNGALAFDME  240
YAHWVDEHQH LLNDLRLAVN SQMSDDELHI LVEGVRVHYN ELFTLKRIGA KADIFHILHG  300
TWKTPVERRF MWLGGFRSSE LLKIIKDHLE PLTEQQLLDI CNLQKSSLQS EDALEKGMEA  360
LEQYLVETLS STSLGPTGNG NVADYMDQMA LAMAKLGELE GLLHQADLLK QHYLRQLQRI  420
LTVRQTARAF LVQNDFISRL RALSSLWLAR PRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0005s01260.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-150AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017426741.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ415581e-144HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0S3T1L10.0A0A0S3T1L1_PHAAN; Uncharacterized protein
STRINGXP_007153359.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-120bZIP family protein