PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678473854
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family HSF
Protein Properties Length: 275aa    MW: 31674.2 Da    PI: 6.0082
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678473854genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind60.44.6e-1956147298
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   F ++l+++l++++++++i+w  +g++f++++ + fa++vL kyF+ ++f+SF+R+Ln +gFk+v  ++      ++++ + hk F +g+ +ll++++
     678473854  56 FPENLMSLLDSDKVSDIIRWLPDGDAFCLIP-SLFAEHVLDKYFQGTKFESFTRKLNRWGFKRVAGQKVP----PNTVAYYHKDFIRGSPKLLKNMN 147
                   88899************************97.58********************************9987....999****************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004152.2E-652152IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467852.86E-1752146IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.106.8E-2455146IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.4E-1956146IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.2E-65679IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.2E-693105IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.2E-6106118IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MDDHDDDDDE EEDDDDDREE DEDRAFPTVA RSAQSLSKDT NTGSDTLKIN TGLLPFPENL  60
MSLLDSDKVS DIIRWLPDGD AFCLIPSLFA EHVLDKYFQG TKFESFTRKL NRWGFKRVAG  120
QKVPPNTVAY YHKDFIRGSP KLLKNMNGGK AKNIAAREKL IHNTQRHHQP KQHERHDSKQ  180
VDMLKDYGSA SISGMDDRRS LLANNNLLFS HPSQLQLLAL EQELHHRKLQ QQLLLDQANN  240
RSMLQQSHLF DTAGTNPALL MLQQQQQQQH HRELE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678473854
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-12heat shock transcription factor B2A