PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678472349 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | NAC | ||||||||
Protein Properties | Length: 367aa MW: 40771.5 Da PI: 4.3726 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 99.6 | 4.3e-31 | 6 | 83 | 50 | 128 |
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+++++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+ + + ++++ g kktLvfy+grap+ge+tdWvmhey++ 678472349 6 KLRTGDRQWFFFSPRDRKYPNGARSNRATSHGYWKATGKDRIISC-GSRAAGSKKTLVFYRGRAPRGERTDWVMHEYTM 83 4567899************************************99.999****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 37.889 | 1 | 106 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.01E-35 | 6 | 106 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-14 | 13 | 82 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence Send to blast |
LAAMSKLRTG DRQWFFFSPR DRKYPNGARS NRATSHGYWK ATGKDRIISC GSRAAGSKKT 60 LVFYRGRAPR GERTDWVMHE YTMDYEELKR CAGATEYYAL YKVFKKSGPG PKNGEQYGAP 120 FREEDWDKED LEVQPFFFGE NPVTKSADDT MPINESMPEN EPIETLRHPQ FDDGNTLGQP 180 VAEQGTESKH SASDVPAPVP HTFIPRIDVP DSNFGQAGMT GVHLHEAAEV SSAPVHHDLD 240 TGLTEEEIFG DFLEMDDLLG PCPDTENPGQ PYGELLLDEL DGLNEFDFQD TSSILFDGGI 300 SQSGQMPETF SGCFGYDMST MSTLSTSTHH FQQQSANVSE FIYTEGQSFC IQGAESGQEN 360 VPSSNPX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-29 | 10 | 112 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-29 | 10 | 112 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-29 | 10 | 112 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-29 | 10 | 112 | 69 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-29 | 10 | 112 | 72 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-29 | 10 | 112 | 69 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-29 | 10 | 112 | 69 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678472349 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011074131.1 | 1e-107 | NAC domain-containing protein 17-like | ||||
TrEMBL | A0A2G9I6C6 | 1e-106 | A0A2G9I6C6_9LAMI; Uncharacterized protein | ||||
STRING | XP_009786294.1 | 6e-95 | (Nicotiana sylvestris) | ||||
STRING | Migut.N02932.1.p | 4e-95 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3212 | 24 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 4e-70 | NAC domain containing protein 17 |