PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678467534
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 208aa    MW: 23272.6 Da    PI: 7.0432
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678467534genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-182272155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  678467534 22 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 72
               59*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.91E-202282No hitNo description
SMARTSM003801.8E-342386IPR001471AP2/ERF domain
PROSITE profilePS5103221.5352380IPR001471AP2/ERF domain
PfamPF008471.1E-112372IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-192382IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.8E-292381IPR001471AP2/ERF domain
PRINTSPR003671.3E-82435IPR001471AP2/ERF domain
PRINTSPR003671.3E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MVKAEEKTSR ASNGNGGGQM KKKYKGVRMR SWGSWVSEIR APNQKTRIWL GSYSTPEAAA  60
RAYDAALLCL KGSSASFNFP ISRDRQGHHL SSDNQDPMTP KTIQRFAAAA ASTGPSKAPS  120
QSSSSSNCVS WPSLLDESSS DDHLSSLAST DFYHFSQEEE EGRAFWCNFD SPKYFYNDVM  180
LNGTTFFLDR HSMDDSKEEV DTFRLWNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-141380472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678467534
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014499978.11e-39ethylene-responsive transcription factor ERF014
TrEMBLA0A2Z7BEZ91e-43A0A2Z7BEZ9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.17e-29ERF family protein