PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678466514
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 348aa    MW: 36466.2 Da    PI: 8.6551
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678466514genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP126.43e-39662022112
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 
                ++k++ ++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +            
  678466514  66 PVKRTCSKDRHTKVDGRGRRIRMPALCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTISLPsqlrssylsssy 165
                689999***************************************************************9998777777777744444555566677777 PP

        TCP  89 .............kaaksaakskksqksaasalnlak 112
                             +++++aa+ +++ + ++ + n+++
  678466514 166 glpqrrgvfvspeDSSQTAASLSFNGAGSSVNPNMKH 202
                7777777777765444444455555555555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.1E-3871196IPR005333Transcription factor, TCP
PROSITE profilePS5136927.2172126IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MDASDDHHHH HRLTPSSGNR PSFPFQLLDK NNDGCSGSAD TLCATPTARK HVTQQIDDGE  60
STKKPPVKRT CSKDRHTKVD GRGRRIRMPA LCAARVFQLT KELGHKSDGE TIEWLLQQAE  120
PAVIAATGTG TIPANFTSLN ISLRSSGSTI SLPSQLRSSY LSSSYGLPQR RGVFVSPEDS  180
SQTAASLSFN GAGSSVNPNM KHENLPETTS QSSVHHQIGS YLLQSSAGAL PTSHASVPAN  240
FFMVDNSSNS QIIIGDPVRT FPPVNGTASR ASMHFMNFPA AVALLQSQQM SGGSGSGIGE  300
GPWSILGPGL LNPYRGGAGG GGGGISGSPA SRDDGGGDNR QDGGNRHS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678466514
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016472329.11e-103PREDICTED: transcription factor TCP14-like
TrEMBLA0A1S4A6U81e-101A0A1S4A6U8_TOBAC; transcription factor TCP14-like
STRINGXP_009794435.11e-101(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28822351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-57TCP family protein