PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678459868

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

G2-like

Protein Properties

Length: 112aa MW: 12642.6 Da PI: 11.0488

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678459868	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.6	1.1e-12	21	45	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 prlrWtp+LH++Fv+av+ LGG+++ 678459868 21 PRLRWTPDLHRCFVDAVQGLGGKDR 45 9*********************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.4E-11	17	45	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.1E-7	21	45	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 112 aa Download sequence Send to blast
MGSCYGRNSN GVRQYVRSKA PRLRWTPDLH RCFVDAVQGL GGKDRDKCFH PEEESLNPSA 60 KRLQILSSSL ENVIRIYLPL NLHARLGQES RRRVAARGSP SLAPTPIMMV KK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678459868

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5433	22	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	4e-15	G2-like family protein