PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678457123
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 336aa    MW: 36664.6 Da    PI: 8.7953
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678457123genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-17186235254
        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr..krfslgkfgtaeeAakaaiaarkkle 54 
                g+ GVr +k +g+++AeIrd +     +  kr++lg+f taeeAa+a++a ++++e
  678457123 186 GFVGVRMRK-WGKYAAEIRDpF-----CkgKRVWLGTFATAEEAAEAYVAKKREIE 235
                799****99.**********77.....335*********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.54E-16186234IPR016177DNA-binding domain
SMARTSM003803.9E-15186249IPR001471AP2/ERF domain
PROSITE profilePS5103216.542186246IPR001471AP2/ERF domain
PfamPF008471.1E-9186235IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-19187235IPR001471AP2/ERF domain
PRINTSPR003675.3E-8187198IPR001471AP2/ERF domain
CDDcd000185.27E-11187218No hitNo description
PRINTSPR003675.3E-8210226IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MIKGIGMMTP MNSLFFLIPS IAPEFTVHRS KWNLTTPGSV ASAAARISGE LTLVCGWISH  60
PQCPPPPWSA LLHHAAPVGA IRPSILHLST GFGCNNTSKN PSPTASQGFL LVFMDRLNCR  120
GADVTKIRVS YSDPYATDSS SDESDAPGCN FKRKVHEILL RRPASRKGEL IGVNFKRVRR  180
SKGDRGFVGV RMRKWGKYAA EIRDPFCKGK RVWLGTFATA EEAAEAYVAK KREIEEKMRA  240
GQQSSDGASQ KSPSSVLESE SWESHDSREK SKASGIKDDC FGGSESWESK NSGEFGVLHG  300
VRLVDKNGFL LGDFSRLDDL SICAAAEYEA ITGACE
Cis-element ? help Back to Top
SourceLink
PlantRegMap678457123
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070807.11e-48ethylene-responsive transcription factor ERF069
TrEMBLA0A2G9GIW91e-47A0A2G9GIW9_9LAMI; Uncharacterized protein
STRINGMigut.E00336.1.p7e-40(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-13cytokinin response factor 4