PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678451266

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

NAC

Protein Properties

Length: 501aa MW: 55597.8 Da PI: 4.4859

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678451266	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.2	6e-31	4	80	51	128
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++++w+fFs+rd+ky++g r+nrat +gyWkatgkd+ + + ++++ g+kktLvfy+grap+g +tdWvmhey+l 678451266 4 LRTGDRQWFFFSPRDRKYPNGARSNRATGHGYWKATGKDRIISC-GSRAAGIKKTLVFYRGRAPRGDRTDWVMHEYTL 80 457899**********************************99.99***************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	38.105	1	103	IPR003441	NAC domain
SuperFamily	SSF101941	1.02E-36	4	103	IPR003441	NAC domain
Pfam	PF02365	4.4E-14	10	80	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence Send to blast
MSKLRTGDRQ WFFFSPRDRK YPNGARSNRA TGHGYWKATG KDRIISCGSR AAGIKKTLVF 60 YRGRAPRGDR TDWVMHEYTL DEEELKRCAT AKEYYALYKV FKKSGPGPKN GEQYGAPFRE 120 EDWDKEDLEV HPFIVGENPV TKSADDTMPI KEIMPKNGQY LSSLDDLREF MNQIEDEPIT 180 YGQLVAEQGT ETNLVEHAAR DVLPPVPHTF IQRIDEPASN FNQTDMTLLH LPETPEFSST 240 PALSVLDTGL TEEEIFGDKD FLEMDDLLCP CPATQYPVQP YGELLLDELD GLNEYDFQDA 300 SSILCDGGIS ESGQMAQGYS SSFGYDIGTM STVSSAAHQM QQHPTNVTEF SYTDGLSCSI 360 HAAESDQEIA LLSNPGFPHD NQSFDHVNLR ATAGAGENGI NQEDDGNDSW FSSALWSYME 420 SIPTTPASAS ERAFVNRALE RMSSFSGLRL NTRYMNVVSG NNVLPSTGKG RTSCLLLLVS 480 LLGVFCAAIW MFGGTPVRSV G

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence Send to blast

MSKLRTGDRQ WFFFSPRDRK YPNGARSNRA TGHGYWKATG KDRIISCGSR AAGIKKTLVF  60
YRGRAPRGDR TDWVMHEYTL DEEELKRCAT AKEYYALYKV FKKSGPGPKN GEQYGAPFRE  120
EDWDKEDLEV HPFIVGENPV TKSADDTMPI KEIMPKNGQY LSSLDDLREF MNQIEDEPIT  180
YGQLVAEQGT ETNLVEHAAR DVLPPVPHTF IQRIDEPASN FNQTDMTLLH LPETPEFSST  240
PALSVLDTGL TEEEIFGDKD FLEMDDLLCP CPATQYPVQP YGELLLDELD GLNEYDFQDA  300
SSILCDGGIS ESGQMAQGYS SSFGYDIGTM STVSSAAHQM QQHPTNVTEF SYTDGLSCSI  360
HAAESDQEIA LLSNPGFPHD NQSFDHVNLR ATAGAGENGI NQEDDGNDSW FSSALWSYME  420
SIPTTPASAS ERAFVNRALE RMSSFSGLRL NTRYMNVVSG NNVLPSTGKG RTSCLLLLVS  480
LLGVFCAAIW MFGGTPVRSV G

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	4e-32	7	109	69	171	NO APICAL MERISTEM PROTEIN
1ut4_B	4e-32	7	109	69	171	NO APICAL MERISTEM PROTEIN
1ut7_A	4e-32	7	109	69	171	NO APICAL MERISTEM PROTEIN
1ut7_B	4e-32	7	109	69	171	NO APICAL MERISTEM PROTEIN
3swm_A	4e-32	7	109	72	174	NAC domain-containing protein 19
3swm_B	4e-32	7	109	72	174	NAC domain-containing protein 19
3swm_C	4e-32	7	109	72	174	NAC domain-containing protein 19
3swm_D	4e-32	7	109	72	174	NAC domain-containing protein 19
3swp_A	4e-32	7	109	72	174	NAC domain-containing protein 19
3swp_B	4e-32	7	109	72	174	NAC domain-containing protein 19
3swp_C	4e-32	7	109	72	174	NAC domain-containing protein 19
3swp_D	4e-32	7	109	72	174	NAC domain-containing protein 19
4dul_A	4e-32	7	109	69	171	NAC domain-containing protein 19
4dul_B	4e-32	7	109	69	171	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678451266

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074131.1	1e-174	NAC domain-containing protein 17-like
TrEMBL	A0A2G9I6B4	1e-168	A0A2G9I6B4_9LAMI; Uncharacterized protein
TrEMBL	A0A2G9I6C6	1e-167	A0A2G9I6C6_9LAMI; Uncharacterized protein
STRING	Migut.N02932.1.p	1e-135	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3212	24	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-89	NAC domain containing protein 17