PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678450464
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 340aa    MW: 35844.4 Da    PI: 10.3281
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678450464genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.42.6e-38621922112
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 
                 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+qa+pai+++tgt++ +a ++  +++ ++ +s+ +sg            
  678450464  62 VTKRSSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIRWLLEQAEPAIIAATGTGTVPAIAMsVNGTLKVPTSATNSGagedlgdrkrrr 161
                5799************************************************************988885554233333333322222345555666666 PP

        TCP  89 .......kaaksaakskksqksaasalnlak 112
                       + +++a++ ++s++ + ++l+l +
  678450464 162 psgvefiDVNSAAPPASNSPATSGNNLSLVN 192
                7777776444444444444444444455444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.0E-3167161IPR005333Transcription factor, TCP
PROSITE profilePS5136927.49768122IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008361Biological Processregulation of cell size
GO:0048364Biological Processroot development
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MASGKELGTD LSVGSNRDIR NHESYPRPSL MAALAPGVSL KEEKQDSGEE DKEARPPPPT  60
QVTKRSSTKD RHTKVEGRGR RIRMPATCAA RVFQLTRELG HKSDGETIRW LLEQAEPAII  120
AATGTGTVPA IAMSVNGTLK VPTSATNSGA GEDLGDRKRR RPSGVEFIDV NSAAPPASNS  180
PATSGNNLSL VNSNTSAITS TTASSISSPL MPVIPLTPMW AIPTLASNSN SSSPTFLIIP  240
PNQTTQVVTI QPGSAVNVTP VVNISTPGRP ISAFVATMPP VTGGSVTLAQ PITQINLQST  300
PTPCFPSSSR DNLAAGSRTQ KFRDITLEVH DKPKLAFHPH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156160RKRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00316DAPTransfer from AT2G45680Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678450464
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091297.11e-120transcription factor TCP9
SwissprotO646471e-59TCP9_ARATH; Transcription factor TCP9
TrEMBLA0A2G9HFB01e-125A0A2G9HFB0_9LAMI; Uncharacterized protein
STRINGMigut.B01672.1.p4e-86(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.11e-57TCP family protein