PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678450116
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WOX
Protein Properties Length: 177aa    MW: 20287.1 Da    PI: 8.8964
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678450116genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.94.8e-20666257
               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
   Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
               +kR+++t+eq+ +Leel+ +  r+p+a+++++++++l    +++ ++V++WFqN++a++++
  678450116  6 SKRWCPTPEQVAVLEELYTRgLRTPTAAQIQKITAHLavygKIQGKNVFYWFQNHKARDRQ 66
               59*****************99*************************************996 PP
2Wus_type_Homeobox114.64.9e-37667364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++RW+PtpeQ+ +Leely++GlrtP++++iq+ita+L+ yGki++kNVfyWFQN+kaR+rqk
          678450116  6 SKRWCPTPEQVAVLEELYTRGLRTPTAAQIQKITAHLAVYGKIQGKNVFYWFQNHKARDRQK 67
                       68***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.025267IPR001356Homeobox domain
SMARTSM003891.7E-4571IPR001356Homeobox domain
SuperFamilySSF466897.27E-11569IPR009057Homeodomain-like
CDDcd000866.89E-6767No hitNo description
PfamPF000461.2E-17766IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.605.6E-8766IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MHSVGSKRWC PTPEQVAVLE ELYTRGLRTP TAAQIQKITA HLAVYGKIQG KNVFYWFQNH  60
KARDRQKLRR KIQKQLHQNH VIPELEVPPP PCNPFFQDLR LPSTASHFPY LHHYPPENAF  120
SQAIGIYDEG PEGVTARSQT SPSIISYDPI FPCCNWSRPL QTLQLFPVRG DQETDAS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678450116
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29591951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.12e-37WOX family protein