PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678449025
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 413aa    MW: 45690.1 Da    PI: 5.8547
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678449025genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09223267554
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                h   E++RR  + +++e L +++P++     +K++ a+++  A+ YIk+L
  678449025 223 HLGTEKQRRVAMHDKYEALSKMIPNP-----TKNDRASVVADAISYIKEL 267
                6668**********************.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.36E-11215279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.976218267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-10221279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.90E-8221272No hitNo description
PfamPF000103.4E-7223267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-6224273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MSGESVRFDQ TSGFIEDGDE NGDSQSQLQA PNAQNLDSSL TQLAASATAL EMEALHHHPF  60
NLRIDYENGN DVRVHEQMGT TFETQDQYLY LHNPSVSTEF IQNFHTVSSP DNPFSVPPQL  120
LPPPCSKFSN LLTSLGVLGQ SSVYDTLDQP SLVRDLFHST STGGGGGTKI GSFFDGEGGL  180
FQNPSHRANG GETGDFECGF FEFTAGEMDH RIGNKRNGNV TKHLGTEKQR RVAMHDKYEA  240
LSKMIPNPTK NDRASVVADA ISYIKELKRT VAELKVLAEK KRSAKERLKR PKVEPNDGMI  300
VGDVNQEDGF TLRSSWLQRK SKHMEIDVRI IDDEVTVKLV QQKRINCLVY VSKVLDELHL  360
DLHHVAGGVI GDYYSFLFNS KICEGSIVYA SALANKLIEA VDQQYAAAVG PPR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00285DAPTransfer from AT2G31220Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678449025
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093423.11e-113transcription factor bHLH91-like
TrEMBLA0A2Z7BHZ11e-104A0A2Z7BHZ1_9LAMI; Uncharacterized protein
STRINGMigut.N01685.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.13e-58bHLH family protein