PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678447959
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 290aa    MW: 33047.9 Da    PI: 10.4259
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678447959genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.44.2e-511242481128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                lp+GfrFhPtdeelv +yL++k++g+k+e+  vi+e+d+y+++Pw+Lp  +  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v +   ++ 
  678447959 124 LPAGFRFHPTDEELVEHYLCRKCAGQKIEA-PVIAEIDLYRFDPWELPGFALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGK--PKTL 220
                799**************************9.89***************65556799************************************98..778* PP

        NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                g+kk Lvfy g+apkg kt+W+mheyrl
  678447959 221 GIKKALVFYAGKAPKGFKTNWIMHEYRL 248
                **************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-56120250IPR003441NAC domain
PROSITE profilePS5100554.255124266IPR003441NAC domain
PfamPF023651.3E-27125248IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MHPGRGERDR ERKKGVFKRA FTWSHPSDPA RPTIPNPNCA VGGNTFSSRK CNDPRVVICP  60
HPQAWAIKRT PPPLKNLRSG CTRAVKEEEE EEEEEEGVVR VSLVGRREKR KKMKGVSQSQ  120
QLNLPAGFRF HPTDEELVEH YLCRKCAGQK IEAPVIAEID LYRFDPWELP GFALYGEKEW  180
YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKPVGKPKTL GIKKALVFYA GKAPKGFKTN  240
WIMHEYRLAN VDRSAGKRTN LRVRTNSTLI QSFFDFNLGL LLMFVLNMAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-7212127512167Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678447959
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022844703.17e-95NAC domain-containing protein 2-like
TrEMBLS8EEE43e-95S8EEE4_9LAMI; Uncharacterized protein
STRINGXP_010674351.14e-92(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12392481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.14e-91NAC family protein