PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678445944
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 303aa    MW: 33018.6 Da    PI: 5.3189
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678445944genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY47.92.7e-151712102159
                -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 rsYYrC+++  C +kk+vers +dp+++ + Y+geH h+
  678445944 171 IRSYYRCSTSkYCVAKKHVERSPNDPSLFLVSYTGEHSHP 210
                69*****99889***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-16126212IPR003657WRKY domain
SMARTSM007741.7E-10138211IPR003657WRKY domain
PfamPF031062.0E-11169210IPR003657WRKY domain
SuperFamilySSF1182901.09E-11169212IPR003657WRKY domain
PROSITE profilePS5081117.982172212IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MDEDDWDLHA VVRGYTATAT ATAAVEDDDY DDDPFPSLSM APVEQASRPD FSFSHLESKE  60
NPSFQGLQEI YGDFYVDPPP PLPVPRVSHA QVVVENQLLG SCNPNSFPTG NPPPSSRPRR  120
RKTQTMKMVR ELTQEELAAD SWAWRNGSCP KGWNPNYPVT SIFDSLLCMC IRSYYRCSTS  180
KYCVAKKHVE RSPNDPSLFL VSYTGEHSHP RPAQRSTPSA KAPHSPGSAS NLTAEAQNGG  240
AAPPEQTVLN GMIRVANGDE LLLQQLHHPH PGDDLLSSAV PSSPPPPPPP PHGGGEEKGL  300
GYT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117121PRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678445944
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGMigut.F00276.1.p8e-45(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138601014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.19e-21WRKY DNA-binding protein 27