PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678444821
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Nin-like
Protein Properties Length: 317aa    MW: 36617.4 Da    PI: 5.2971
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678444821genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.77.4e-26146196252
     RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                +k++s +++s +F+lpi++AA+eL+v+lT+LK++CR++GIkRWPhRk++sl
  678444821 146 SKRLSRKEISDCFYLPITQAARELNVGLTLLKKRCRELGIKRWPHRKLTSL 196
                689*********************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.12132217IPR003035RWP-RK domain
PfamPF020422.0E-20149196IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MENAAALNMM LPNHQTPPKE EYEQFYSFAP LDFNCGFYGF NGWDMQHNYY GTPVNVFDGA  60
SLPDFTVCDP FYQPQQQTSF TQEAFDYEWD DMKPGFYEVH KQQQLPQENI EKETAVIFDQ  120
ENLLNEEKSK RSMKNHVKNS SSSSSSKRLS RKEISDCFYL PITQAARELN VGLTLLKKRC  180
RELGIKRWPH RKLTSLQTLI KNVQDLGNDD AVGLRESIKV LQQEKKLMEE IPDMQLEEKT  240
KRLRQACFKA NYKKRKVMAM VVSSPVPVTS CNRVTEDLIN PVDYYASRST DDDDEQLKYF  300
IADCISSTSS DCVGLLP
Cis-element ? help Back to Top
SourceLink
PlantRegMap678444821
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071711.15e-77uncharacterized protein LOC105157108
TrEMBLA0A2G9H3R81e-65A0A2G9H3R8_9LAMI; Uncharacterized protein
STRINGVIT_17s0000g06250.t015e-60(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42742142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.19e-45RWP-RK domain-containing protein