PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678443390 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 155aa MW: 17223.3 Da PI: 7.3646 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.9 | 1.3e-14 | 1 | 48 | 10 | 60 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 + +NRe+A+rsR RK+a+++eLe+ v++L +eN++L+k+l + +++ k 678443390 1 MVSNRESAQRSRIRKQARLAELEQQVDKLRGENDSLAKQL---ADASQQFK 48 579**********************************555...55554444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 9.64E-10 | 1 | 45 | No hit | No description |
PROSITE profile | PS50217 | 9.76 | 1 | 57 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.32E-15 | 1 | 47 | No hit | No description |
Pfam | PF00170 | 2.5E-11 | 1 | 46 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.7E-11 | 3 | 48 | No hit | No description |
SMART | SM00338 | 7.6E-8 | 3 | 56 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MVSNRESAQR SRIRKQARLA ELEQQVDKLR GENDSLAKQL ADASQQFKDA TTNNRVLRSN 60 VEALRAKVKL AEDMVARGCL TSSMTHLLQN YLNMPEDYVN NTIINRLAPE MMAPGGAANP 120 NAVSEIARAN NGDKTERRND DGDVTGAALP DIWNW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT-3'. May be involved in the regulation of genes expressed during seed development (PubMed:7919992). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:7919992}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678443390 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082101.2 | 7e-43 | basic leucine zipper 9 | ||||
Swissprot | Q6ETX0 | 2e-35 | RSBZ3_ORYSJ; bZIP transcription factor RISBZ3 | ||||
TrEMBL | A0A2G9HEL5 | 5e-42 | A0A2G9HEL5_9LAMI; Uncharacterized protein | ||||
TrEMBL | A0A4D9A2D3 | 4e-42 | A0A4D9A2D3_SALSN; Uncharacterized protein | ||||
STRING | XP_009801058.1 | 9e-39 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8139 | 22 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 2e-37 | basic leucine zipper 9 |
Publications ? help Back to Top | |||
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