PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678426975
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 253aa    MW: 28029.4 Da    PI: 7.1097
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678426975genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11133180455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  678426975 133 SHSLAERARREKISERMKILQDLVPDC----NKVIGKALVLDEIINYIQSLQ 180
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.24E-10127184No hitNo description
SuperFamilySSF474594.32E-16127193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-16129194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.631129179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-8133180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-11135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MDLRVEEFSL AEMWAGFQMN HKPGSYEMSV DQMAIGHGLI QHRHDSIQRR REREHCTMEG  60
ASTGTTIDGN NSGSNVMNQE VNKEVGRLSG NGVSKAGEEG SLGKNAGKPS KTAESPKQDY  120
IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPDCN KVIGKALVLD EIINYIQSLQ  180
HQVEVTNLCH YVVSLKLEAV NSRLGIDQCH SKEFPLRTFN APTVPFDSQN APVYSGGSTS  240
SPEWLQMHIG GGF
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678426975
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071046.14e-77transcription factor bHLH79-like
SwissprotQ69WS35e-56BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2Z7DB637e-78A0A2Z7DB63_9LAMI; Uncharacterized protein
STRINGMigut.L01368.1.p3e-74(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.19e-58BIG PETAL P