PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678419519 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | WRKY | ||||||||
Protein Properties | Length: 257aa MW: 28884.2 Da PI: 6.3109 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.1 | 8.5e-24 | 110 | 169 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +D+y+WrKYGqK+++++++pr+YYrC+ + +Cp+kk v++++++p v++i+Y g+H + 678419519 110 QDEYQWRKYGQKNIQDAKHPRAYYRCSKSkshNCPAKKFVQQTEDNPVVLTIKYLGDHVC 169 7**************************98888**************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-23 | 100 | 170 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.428 | 104 | 167 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-21 | 105 | 169 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.8E-27 | 109 | 171 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.7E-22 | 110 | 169 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MEGGELESVV QVLSEGRERV DQLERKLRGA NKSGEDGCFA LLAAVSSSID GALEKIRWMG 60 AAGNDATSHV SIPNDLGSVD SHQVQQVSDK KRKPIRTWTV HLTGTEALNQ DEYQWRKYGQ 120 KNIQDAKHPR AYYRCSKSKS HNCPAKKFVQ QTEDNPVVLT IKYLGDHVCV QQKAKKPKQN 180 PTFSEERQDE LQLDPLRELP YHYPTTATES VPFETQILED VAGESYSTLW NANPCLESGF 240 TGSYNSPDHT MLFILNT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 6e-14 | 115 | 169 | 14 | 68 | OsWRKY45 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678419519 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5553 | 22 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 1e-19 | WRKY family protein |