PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678405787
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 276aa    MW: 30924.4 Da    PI: 4.644
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678405787genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.89.2e-2370123359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D ++WrKYGqK++kgs++pr    C+s+ gCp++k+vers  dp+++ +tY+ +Hnh+
  678405787  70 DSWAWRKYGQKPIKGSPYPR----CSSSkGCPARKQVERSCVDPSMLLVTYTCDHNHP 123
                99***************996....99888****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.4E-2463125IPR003657WRKY domain
SuperFamilySSF1182902.22E-1967125IPR003657WRKY domain
SMARTSM007742.0E-2768124IPR003657WRKY domain
PROSITE profilePS5081125.29370125IPR003657WRKY domain
PfamPF031063.6E-1870123IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MEAKNMKLEG DNSPEIPNGN HPWRSVLRDA KTTSSKRSRK GIQKRVVSIP FKELEGLRLK  60
GDQMSSPPPD SWAWRKYGQK PIKGSPYPRC SSSKGCPARK QVERSCVDPS MLLVTYTCDH  120
NHPCPATLRS NSHNFNASKT VTTMEEDEEE QEEEEEEGEE EEKNKPRKEI DHIVSEEPPP  180
LINATDYWWF ADFEPASCID AVDIPAGCVD DNEKDMAMIL TMREEDEPLF ADLGELPECS  240
TVFRRGMADQ RPAGDSSPPA AGSFHLATTM VSSGHE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-13701251674WRKY transcription factor 1
5w3x_B1e-1344126680Disease resistance protein RRS1
5w3x_D1e-1344126680Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678405787
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022898713.16e-69probable WRKY transcription factor 65
TrEMBLA0A2G9HVF25e-75A0A2G9HVF2_9LAMI; Uncharacterized protein
STRINGSolyc02g072190.2.11e-63(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64752333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.16e-52WRKY DNA-binding protein 65