PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678401322 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | bZIP | ||||||||
Protein Properties | Length: 161aa MW: 17681.8 Da PI: 7.0741 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.2 | 4.3e-14 | 23 | 81 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR+RK++ ++ L+ + +eL +eN ++ + + + +a+++s + 678401322 23 RKRKRMESNRESARRSRLRKQKHLDDLTAEGAELRKENAQMLRSVGLMMESYARMESAN 81 6789*************************************************999977 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-15 | 19 | 83 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.634 | 21 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-10 | 23 | 78 | No hit | No description |
SuperFamily | SSF57959 | 6.88E-11 | 23 | 78 | No hit | No description |
Pfam | PF00170 | 3.1E-12 | 23 | 81 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 6.41E-20 | 24 | 75 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 26 | 41 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009845 | Biological Process | seed germination | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MASSAGISSV SGAGSDGDLV DQRKRKRMES NRESARRSRL RKQKHLDDLT AEGAELRKEN 60 AQMLRSVGLM MESYARMESA NSVLRAQMTE LTQSLNYLNG VLNSVSNNPH HYGGACTSES 120 EEFHMGLSEG FFPSGGMWNP NAPGGGQHFP IMATAEMMFN Y |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 22 | 43 | RKRKRMESNRESARRSRLRKQK |
2 | 35 | 41 | RRSRLRK |
3 | 35 | 42 | RRSRLRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00239 | DAP | Transfer from AT1G75390 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678401322 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011083621.1 | 1e-42 | bZIP transcription factor 44 | ||||
TrEMBL | S8D693 | 2e-41 | S8D693_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.C00766.1.p | 9e-37 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA537 | 24 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 1e-33 | basic leucine-zipper 44 |