PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678400617 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | WRKY | ||||||||
Protein Properties | Length: 184aa MW: 19903.3 Da PI: 8.457 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.9 | 2.6e-10 | 164 | 184 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +D ++WrKYGqK++kgs+fpr 678400617 164 SDLWAWRKYGQKPIKGSPFPR 184 699*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 12.943 | 158 | 184 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 5.3E-8 | 161 | 184 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.97E-7 | 162 | 184 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.7E-5 | 165 | 184 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MENKYQGDLA DIIRAGNGGG GGGSWGAEEA GSWEFPMNFL AYPDEEFGDP FIHFRDPLLS 60 DTETRGSGFL QASSFYRPGF HEGGVGLSMG VEPPFGDPPA AQKRPLVHSD GISISKQKMD 120 GPDTQISSPR NTGTKRRKNQ AKKVVCIPVP LPANARSGGE VVPSDLWAWR KYGQKPIKGS 180 PFPR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678400617 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010036632.1 | 9e-45 | PREDICTED: probable WRKY transcription factor 14 | ||||
TrEMBL | A0A059A3C8 | 2e-43 | A0A059A3C8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010036632.1 | 3e-44 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6701 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 2e-30 | WRKY DNA-binding protein 14 |