PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678392696
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 323aa    MW: 36248.8 Da    PI: 6.2829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678392696genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.3e-28124184259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                +Dgy+W+KYGqK++ g+++prsYYrCt++   +C + k+v+rs++dp+v+e+tY+g H+++
  678392696 124 EDGYSWKKYGQKDILGAKYPRSYYRCTYRlmhNCGAMKQVQRSDDDPDVFEVTYNGVHTCN 184
                7***************************9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-27118185IPR003657WRKY domain
SuperFamilySSF1182905.49E-25122185IPR003657WRKY domain
SMARTSM007744.0E-37123185IPR003657WRKY domain
PROSITE profilePS5081120.576124186IPR003657WRKY domain
PfamPF031065.8E-26124183IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MVMETDWIFK HKKLVFELSE GMEKAQQLQQ NLSSMYPCGL DAFLLHRIIS CFENALGILN  60
SRAQIGTVQN ASMDSPVSAN EVPRSYDSSN TVKHRDASKK RKLICTRKEL VRVNSKNGLE  120
GPSEDGYSWK KYGQKDILGA KYPRSYYRCT YRLMHNCGAM KQVQRSDDDP DVFEVTYNGV  180
HTCNQDHISD PKPESLQGLQ PDRNSSHNYQ ALPPNDKLLN MKASLRFDTK ILSTTEMAAH  240
DSFLSPIIPA LDDDSGVNSC SSQAFDSPVT PDSEAFHQMR SIHGEVPNAT TLHGSTTTEG  300
VIFPIYDLPV DPNFLFDIMG FPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B6e-181251811874Disease resistance protein RRS1
5w3x_D6e-181251811874Disease resistance protein RRS1
Cis-element ? help Back to Top
SourceLink
PlantRegMap678392696
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.15e-45WRKY family protein