PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678391598
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 311aa    MW: 34477.9 Da    PI: 8.1358
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678391598genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.61e-48241523128
        NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                pGfrF+Ptdeelv++yL++kv++k+++  evik++diyk++PwdL  + k+    e+ewyfF+kr +ky+++ r+nr+t sg+Wkatg d++v+s+ +g+
  678391598  24 PGFRFNPTDEELVSFYLRRKVAKKPMNP-EVIKHADIYKHDPWDLVGCSKGkgmAEREWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPVTSAsGGH 122
                9************************999.99**************843333223677*************************************997888 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 +glkk+Lv+y g+a kg+kt+W+mhe+rl
  678391598 123 IIGLKKSLVYYMGSAGKGTKTEWMMHEFRL 152
                9***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.15E-5422177IPR003441NAC domain
PROSITE profilePS5100553.12122178IPR003441NAC domain
PfamPF023658.5E-2624152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MEVEIMSTAT DGSPGDADAD VPLPGFRFNP TDEELVSFYL RRKVAKKPMN PEVIKHADIY  60
KHDPWDLVGC SKGKGMAERE WYFFCKRGRK YRNSIRPNRV TGSGFWKATG IDRPVTSASG  120
GHIIGLKKSL VYYMGSAGKG TKTEWMMHEF RLPPPSASAS KSSDDEAEVW TLCRLLRRSA  180
TRSKSLPEYK APSSSSKISD VFDSKAVLQP DQCCSENSSI GSSDCRSRFI NFCPESGSQC  240
ENEKPYSAQP ALQFGKHQFW GQPSGGVLQP IPMLSSSCIE ELLKHADWED LISVVNYGNA  300
MGNYLYPPGS S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-442418419171NO APICAL MERISTEM PROTEIN
1ut4_B1e-442418419171NO APICAL MERISTEM PROTEIN
1ut7_A1e-442418419171NO APICAL MERISTEM PROTEIN
1ut7_B1e-442418419171NO APICAL MERISTEM PROTEIN
3swm_A1e-442418422174NAC domain-containing protein 19
3swm_B1e-442418422174NAC domain-containing protein 19
3swm_C1e-442418422174NAC domain-containing protein 19
3swm_D1e-442418422174NAC domain-containing protein 19
3swp_A1e-442418422174NAC domain-containing protein 19
3swp_B1e-442418422174NAC domain-containing protein 19
3swp_C1e-442418422174NAC domain-containing protein 19
3swp_D1e-442418422174NAC domain-containing protein 19
4dul_A1e-442418419171NAC domain-containing protein 19
4dul_B1e-442418419171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678391598
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022848324.14e-91transcription factor JUNGBRUNNEN 1-like isoform X1
TrEMBLA0A346HE909e-91A0A346HE90_9LAMI; NAC042 transcription factor
STRINGSi036447m9e-83(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16972469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.18e-71NAC domain containing protein 42