PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678389376
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 189aa    MW: 21854.5 Da    PI: 4.7984
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678389376genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.22.4e-1578126553
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                k++rr+++NRe+ArrsR RK+++++eL+  v  L +eN++L ++l++  
  678389376  78 KKQRRMISNRESARRSRMRKQKYLDELRSQVIFLIKENRQLMDKLSSVW 126
                9*****************************************9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.9E-1674138IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.89876125IPR004827Basic-leucine zipper domain
PfamPF001709.9E-1378130IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-1278126No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-1378151No hitNo description
CDDcd147025.39E-1679125No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MQPSQLSECY PLPSSLMQLP DQFGFDTSIM SSPCNFSDSS NPLLRPQIRE ASAKSTSFNS  60
NSTSDEADEK QLSILDEKKQ RRMISNRESA RRSRMRKQKY LDELRSQVIF LIKENRQLMD  120
KLSSVWEIRD HVIQENTQLR EQTVELRQIL TDMQLSNQFT SLVQFDDDPC NNLAYSESEG  180
AVFGILCEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19097RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678389376
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099071.17e-61basic leucine zipper 43
SwissprotQ9FMC23e-33BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A4D9BU751e-55A0A4D9BU75_SALSN; Uncharacterized protein
STRINGMigut.H00570.1.p4e-54(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.18e-38basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]