PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678377576 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | G2-like | ||||||||
Protein Properties | Length: 236aa MW: 26415.3 Da PI: 4.1796 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 51.7 | 1.9e-16 | 113 | 161 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r+ W++eLH +Fv+ave+ G+ +tPk+ile+m + L + hv+SHLQ 678377576 113 KERVSWNEELHGKFVKAVEKF-GIG-TTPKRILEFMADPRLKRRHVASHLQ 161 68*******************.666.8************************ PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.68E-9 | 110 | 161 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.7E-17 | 111 | 161 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.6E-16 | 113 | 161 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MPCSSLTAAL ASLPDEIDQV VVLVSVDGEF KKIEKEAAPD NVPVLVVLCE RRALCFCYDI 60 PIPMPEVCSV MNQYVRDIEG APFNTPTGTS QRRSFESTNR EVESVDGSYK KKKERVSWNE 120 ELHGKFVKAV EKFGIGTTPK RILEFMADPR LKRRHVASHL QDAPPINPDE QPQSLDDQQQ 180 DAPPINPDER SQSLDDQQQD APPINLNEPS QCLDDQQQDA LSIDPDEPSQ SSDDEE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678377576 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58080.1 | 4e-12 | response regulator 18 |