PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678366667
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family YABBY
Protein Properties Length: 273aa    MW: 30286 Da    PI: 9.0892
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678366667genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY28.64.5e-091071442461
      YABBY  24 vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61 
                v vPst l + v +rCGhCt +lsv+++k +  + +e 
  678366667 107 VLVPSTRLCMAVKIRCGHCTGMLSVDMRKLALFRLSET 144
                88************************999885544433 PP
2YABBY29.52.4e-09190215135160
      YABBY 135 eeiqrikasnPdishreafsaaaknW 160
                 ei+r+k++nP++shr af++a+kn 
  678366667 190 HEIKRLKTENPEMSHRGAFATASKNV 215
                58**********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046901.2E-14106215IPR006780YABBY protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MPASVSLLAT CCRHQKLAKY SPKPQDIKSV VAGAGYEGEC RDKYSMKRTG NGGLGKFPEL  60
QGATYLHEMW ILQYSLTCNQ LPRSAKTMFW HEFLSSHPLS VLTWRQVLVP STRLCMAVKI  120
RCGHCTGMLS VDMRKLALFR LSETCSPRIQ HKLEAAPEEI PSAGKLTEAC YSPASSPSEK  180
DERGCLSFLH EIKRLKTENP EMSHRGAFAT ASKNVSAERT AAFAYNVPRQ LIRYFLDVFS  240
GRIALSFSTN LEGCCNGGSR KRAMDAPSPC YCG
Cis-element ? help Back to Top
SourceLink
PlantRegMap678366667
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.21e-11YABBY family protein