PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678364822
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 369aa    MW: 41474.9 Da    PI: 6.5733
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678364822genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-1180123245
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                ++ k  rr+++NReAAr+sR+RKka++++Le+   +L    ++L
  678364822  80 CDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLAHLEQEL 123
                788999*************************9665555555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-879125No hitNo description
SMARTSM003382.1E-779143IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.25581125IPR004827Basic-leucine zipper domain
PfamPF001709.2E-883123IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-783124No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
PfamPF141445.5E-26167241IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MASSEMFSSV VGTGNGYLGN GQFENLTGFG VSADHGQQTD TSTDNDVKNQ QANHSEFPKS  60
VHRERLHMVD GMHQIHGNDC DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLAHLE  120
QELKNARPQV PLNGTGVSDV YQSVAGTGDS AFDLSYARWL DEHQRLISDL RAMVNSQAGE  180
SELQLLVDCI VSHYDEVFQM KRIGAKSNVF HMLSGMWKSP AERYFLWLGG FRCSDVLKIL  240
ANQIEPLTGQ QLVGICNLQQ SSQQAEDALS QGMEALHQSL VDTLSSHTVS MHNPENIDAY  300
MEQMAIAMSK LAALENFLYQ ADLLRQQTLQ QLQRLLTASQ AAKALLAIIL ALQLERLISY  360
YFIYFYIFA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678364822
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077152.11e-145transcription factor HBP-1b(c38)-like
SwissprotQ6IVC31e-117TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A4D9A4X81e-147A0A4D9A4X8_SALSN; Transcription factor TGA
STRINGXP_004150536.11e-141(Cucumis sativus)
STRINGXP_004168679.11e-142(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-112bZIP family protein
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]