PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678359678
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 288aa    MW: 32430.9 Da    PI: 6.4386
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678359678genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.31.6e-28133191259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs+fprsYYrC+++ gC ++k+ve+s ++p  ++itY+ eH h+
  678359678 133 SDLWAWRKYGQKPIKGSPFPRSYYRCSTTkGCLARKQVEQSCTNPGKFIITYTAEHSHS 191
                799***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.1E-29120193IPR003657WRKY domain
SuperFamilySSF1182904.58E-25126193IPR003657WRKY domain
PROSITE profilePS5081131.823127193IPR003657WRKY domain
SMARTSM007742.3E-33132192IPR003657WRKY domain
PfamPF031068.7E-24134190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MGAEDWSLHA IVHESSGIYD LETRGLFSDK PFFDFSSGGV NDHDLFTLFP ELSKDDDLED  60
LYKPFYQLSP HPLPSSTVID FQEQNPDDET KSSSGSDGSS TTLAAPGHTP RYKSRKSHGK  120
RVVIQVSAED LTSDLWAWRK YGQKPIKGSP FPRSYYRCST TKGCLARKQV EQSCTNPGKF  180
IITYTAEHSH SQPTRRNSLA GTVRQKFNTI KMKNVVGDST KTRHHRHESA AAVWPPTRRG  240
IDINSNNQAS EKQVLAKMVE QEEVDDLAMS DLIFNQDFSG LEEFEGFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-18124193877Probable WRKY transcription factor 4
2lex_A3e-18124193877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678359678
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081142.23e-83probable WRKY transcription factor 29
TrEMBLA0A2G9GRG62e-80A0A2G9GRG6_9LAMI; Uncharacterized protein
STRINGMigut.A00718.1.p2e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-50WRKY family protein