PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678359319
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 274aa    MW: 30141.4 Da    PI: 6.5177
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678359319genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-1991141155
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                ++++GVr ++++g+W+AeIr+p+    r  r +lg+++taeeAak +++a+ +l+g
  678359319  91 KKFRGVR-HRRWGKWAAEIRVPR----RrIRLWLGTYDTAEEAAKVYDHAAIQLRG 141
                59****9.777**********83....35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.89E-2991148No hitNo description
PfamPF008476.8E-1192141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-2892149IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-2092150IPR016177DNA-binding domain
PROSITE profilePS5103223.06492149IPR001471AP2/ERF domain
SMARTSM003803.1E-3392155IPR001471AP2/ERF domain
PRINTSPR003673.0E-993104IPR001471AP2/ERF domain
PRINTSPR003673.0E-9115131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MFPCGVKFSE HVTRTTVVAG CCPGEPRAHS SSSGRTLRIS VTDQDATDSS SDEEDVSLNR  60
RHVRRYVNEV TIQPDKGGGA RVSARRANGD KKFRGVRHRR WGKWAAEIRV PRRRIRLWLG  120
TYDTAEEAAK VYDHAAIQLR GPNALTNFSI PEAAASRKSP GHNSGDESQR NSAESPSSVL  180
RPVSPQKPDN SPGESLSTTV FPWKEDIFAD LGNPVAIPDL FEQAGFFDDV FPLDVIPSCV  240
SDPDVASSSS PLRPIDDYFK QDDISAMFLD WGAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-15921481471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678359319
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080873.12e-64ethylene-responsive transcription factor CRF2
TrEMBLS8E6384e-71S8E638_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.A00686.1.p2e-58(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-45cytokinin response factor 4