PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678347711
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 582aa    MW: 62954.4 Da    PI: 6.7345
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678347711genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.81.2e-19253310260
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                dD++ WrK+ qK+vkgse+p + Y+Ct++ +C vk+kve  + ++++++++Y g+Hnh+k
  678347711 253 DDEHGWRKFAQKQVKGSEHPMN-YKCTHEkNCAVKRKVEPFQ-EGDIIQTVYDGTHNHSK 310
                8*******************98.6****99**********99.***************85 PP
2WRKY104.27.2e-33424482159
                ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+++d k+v++tYeg+Hnh+
  678347711 424 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCNVRKHVERASHDLKCVITTYEGKHNHD 482
                59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-17250310IPR003657WRKY domain
SuperFamilySSF1182903.27E-14251309IPR003657WRKY domain
SMARTSM007741.2E-14252310IPR003657WRKY domain
PROSITE profilePS5081113.253253311IPR003657WRKY domain
PfamPF031061.9E-15253308IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-37409484IPR003657WRKY domain
SuperFamilySSF1182901.44E-28416484IPR003657WRKY domain
PROSITE profilePS5081138.308419484IPR003657WRKY domain
SMARTSM007748.0E-38424483IPR003657WRKY domain
PfamPF031068.8E-25425482IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MPSNGSPRSI FSSMMNDNTV AGALGEPVVD KNQPQFEGRT GSGKTDENET SIKDSGEIES  60
NAFSESRASS RGNLVKRMAT RAGTKAPRLN TQGIGPPDIP DTSDGQPNFL MTIPPGLSPT  120
TLLESPVLLH NSQLMPSPTT GKFFFPPFGS GCSLAPIVDK GQENSFHDSS SFTFQPTAES  180
GPLLYHNSAN KGRDTDMGLV PVHAGDSNPQ ESISNEYYAK SLGEKPSNNG TSETCQDENG  240
DQYCGDPSGS PCDDEHGWRK FAQKQVKGSE HPMNYKCTHE KNCAVKRKVE PFQEGDIIQT  300
VYDGTHNHSK SLPNRRDTSQ HDPSVNRDLA RSTAHKMNTI PQEHSNGCGS QSQAQVELGD  360
GLGGSSAYSN DEDDDRAMGG EGEELDSKKR RHETSCIPDL SVINRAVVRE PRVVVQTTSD  420
VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TSPGCNVRKH VERASHDLKC VITTYEGKHN  480
HDVPAARNSS HNSGGLNNQQ PSPLAVSGGV HRLELSHILG NSACFRQPET GSYGLSGKPQ  540
MNAGPMYGLG GLNQPPHVGL PGLQKLPLLH PYSGSLPPPM NR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-37415485878Probable WRKY transcription factor 4
2lex_A4e-37415485878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678347711
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097672.11e-151probable WRKY transcription factor 2 isoform X1
TrEMBLA0A2G9HU771e-146A0A2G9HU77_9LAMI; Uncharacterized protein
STRINGPOPTR_0001s47670.11e-128(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37112341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.14e-90WRKY DNA-binding protein 2