PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678346548
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 386aa    MW: 40986.3 Da    PI: 6.5158
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678346548genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.46.7e-23301363163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+ +lk e+++l s++
  678346548 301 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENMSLRAEITRLKSEYEQLLSQN 363
                89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.4E-26194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.8E-43135268No hitNo description
Gene3DG3DSA:1.20.5.1708.0E-20294362No hitNo description
PfamPF001705.2E-21301363IPR004827Basic-leucine zipper domain
SMARTSM003385.3E-23301365IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.403303366IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-11304361No hitNo description
CDDcd147025.68E-25306356No hitNo description
PROSITE patternPS000360308323IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MSSSEADKSS KEDKEANDAR TPTSQIPAAS GAIPADWTGF QAYSPMPPHG FLASSPQAHP  60
YMWGVQQFIP PYGPPPHPYV AMYPHGGLYA HPTMTPVGAY PFSPFGMPSS NGIVEAPVIG  120
PSVEVDGKSP EGKAKLPIKR SKGSLGSLNM ITGKKNERGN ESGAVANGAH SKSDESASEG  180
SSEGSDANSQ HESQVKSSDR PDSATEEPSQ NGSTSQNGGS SGPHIMIGQT VPIVPVPAVG  240
AVSGIPGPQT NLNIGIDYWG TATSPTIPAM HGKVPAAPVT GGVVAPGTHD GIQSQMWIQD  300
ERELKRQRRK QSNRESARRS RLRKQAECDE LAQRAEALKE ENMSLRAEIT RLKSEYEQLL  360
SQNASLKERL GEHPGHKGSH EEEDGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317323RRSRLRK
2317324RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678346548
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082310.10.0bZIP transcription factor 16-like isoform X2
RefseqXP_020550561.10.0bZIP transcription factor 16-like isoform X2
RefseqXP_020550562.10.0bZIP transcription factor 16-like isoform X2
SwissprotQ501B21e-145BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A4D8Y7P40.0A0A4D8Y7P4_SALSN; Plant G-box-binding factor
STRINGXP_006471481.11e-180(Citrus sinensis)
STRINGXP_006432686.11e-180(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-106basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]