PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678346118
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 297aa    MW: 33763.9 Da    PI: 10.04
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678346118genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.17.6e-12185226351
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV+++  + +W A I++      +k+++lg+ +++eeAa+++++a+ 
  678346118 185 MRGVYYK--NRKWQAAIKVD-----KKQIHLGTVDSEEEAARLYDRAAF 226
                79**985..56********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.73167239IPR001471AP2/ERF domain
SMARTSM003801.5E-4184243IPR001471AP2/ERF domain
PfamPF008471.4E-5185227IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-9185228IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.5E-7186230IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MSNVMQQLLV RGRGSLPTTA LDWNLPPRPP SFLLPTATAN LWILFCLGWI LSTAHILALA  60
FNHPVDSLVR RIKAMVSIRR RRPLGIFCAG QKSASGETSL SVHGNMSPKD SNESASAHPL  120
QLNDGCIPEQ ANQVATLVVV AASPKLSDPN TLKQDDHFRQ FLVAEVEHRK PHRRRRAENR  180
ELCTMRGVYY KNRKWQAAIK VDKKQIHLGT VDSEEEAARL YDRAAFMCGR EPNMKLSEEE  240
KNELRKYKWE EFLALTRSTI ANKRLRRNAK GCHQVEKANE KPRYIDFPGC EDDILMA
Cis-element ? help Back to Top
SourceLink
PlantRegMap678346118
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552256.17e-63ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A022RKB28e-53A0A022RKB2_ERYGU; Uncharacterized protein
STRINGMigut.N00633.1.p1e-53(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-40ERF family protein