PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678342560

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

bZIP

Protein Properties

Length: 521aa MW: 56620.2 Da PI: 10.2943

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678342560	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.8	1.7e-16	444	494	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN+ L+k+ el ++ 678342560 444 RRQRRMIKNRESAARSRARKQAYTVELEGEVAKLKEENENLRKKQAELVEM 494 79****************************************999888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.8E-15	440	504	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	442	491	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-14	444	495	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	9.2E-15	444	493	No hit	No description
SuperFamily	SSF57959	1.25E-11	444	495	No hit	No description
CDD	cd14707	8.44E-26	444	491	No hit	No description
PROSITE pattern	PS00036	0	447	462	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence Send to blast
MGRTRGRCGL PTSFSTLQPG IPRRFQCFPG PMLHIALVIS FALSDHCSRV AGFPLSNTRR 60 NRLLDHILRL QSQRIQRAAL RRNLHRTGFQ CSPPLFQVLQ VWGVCDWAIG MGSDFDFKGV 120 GGEGGGGANT PQVDFQLPRQ LSIYSMTFDE FQSSVGGIGK DFGSMNMDEL LKNIWSAEEN 180 NGFGSTSTAA GKDGAAPGYL QRQGSLTLPR TLSQKTVDEV WRDISKEFGP GKEENIPVSG 240 MNFTQTQRQV TLGEVTLEEF LVRAGVVREE VQGAPPPKPS AIGFLGNFST PMSSSSGYVY 300 QHQQGGLMGG LVPESGNSPS LQSANLVVDS KGARHQLSPQ NPQPVLPKQT ALAYGSTVRL 360 ANSNHHLAST GTRNGILGIP EQTVNKPVLQ NYGLPSAGLG MIGAGSPVIS PSNGEPSSSV 420 SPVPYFIGGL SGRKTPALEK VVERRQRRMI KNRESAARSR ARKQAYTVEL EGEVAKLKEE 480 NENLRKKQAE LVEMHRNQVL ELMSQQESKR KCLRRTGSGP L

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence Send to blast

MGRTRGRCGL PTSFSTLQPG IPRRFQCFPG PMLHIALVIS FALSDHCSRV AGFPLSNTRR  60
NRLLDHILRL QSQRIQRAAL RRNLHRTGFQ CSPPLFQVLQ VWGVCDWAIG MGSDFDFKGV  120
GGEGGGGANT PQVDFQLPRQ LSIYSMTFDE FQSSVGGIGK DFGSMNMDEL LKNIWSAEEN  180
NGFGSTSTAA GKDGAAPGYL QRQGSLTLPR TLSQKTVDEV WRDISKEFGP GKEENIPVSG  240
MNFTQTQRQV TLGEVTLEEF LVRAGVVREE VQGAPPPKPS AIGFLGNFST PMSSSSGYVY  300
QHQQGGLMGG LVPESGNSPS LQSANLVVDS KGARHQLSPQ NPQPVLPKQT ALAYGSTVRL  360
ANSNHHLAST GTRNGILGIP EQTVNKPVLQ NYGLPSAGLG MIGAGSPVIS PSNGEPSSSV  420
SPVPYFIGGL SGRKTPALEK VVERRQRRMI KNRESAARSR ARKQAYTVEL EGEVAKLKEE  480
NENLRKKQAE LVEMHRNQVL ELMSQQESKR KCLRRTGSGP L

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678342560

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074426.1	1e-133	bZIP transcription factor 23
Refseq	XP_011074427.1	1e-133	bZIP transcription factor 23
Swissprot	Q9M7Q4	3e-97	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2G9I692	1e-125	A0A2G9I692_9LAMI; BZIP transcription factor MafK
STRING	Solyc04g078840.2.1	1e-120	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-83	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]