PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678339316
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 495aa    MW: 54683.9 Da    PI: 6.6758
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678339316genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.63.1e-09183226245
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                ++ k+ rr+++NReAAr+sR RKka++++Le+   +L +  ++L
  678339316 183 RDQKALRRLAQNREAARKSRMRKKAYVQQLENSRLKLAQLEQEL 226
                78899**************************9655555444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-6182247IPR004827Basic-leucine zipper domain
PfamPF077161.4E-4184227IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438184228IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.32E-6186227No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-6186228No hitNo description
CDDcd147084.05E-21186237No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
PfamPF141443.4E-28271343IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MHSFKAAAAT QAMVLNNSDV YCQHQSTFYQ RDEDSRNGTR FADLGELEQS TENGFHNDDA  60
GLSRSAMYTA MKTTNVSAIS SGLQFGGHNN SLASAEMFPP GATAVDSSRF AVPKGPLAGI  120
GAGNGYLVSG PFENWADSGM LADNSQQTDT STDTDDKNQY LGGENHERLH ADDSTNEANR  180
KDRDQKALRR LAQNREAARK SRMRKKAYVQ QLENSRLKLA QLEQELKRAR QPGPFLSNGG  240
VADQCNSAGG NGSSSFDLSY TRWLDEHQRL IGDLRSAVNC QAGESDLRLL VEGVMSHYDE  300
VFRLKSIGAK SDVFHMLSGM WKTPTERCFM WLGGFRCSEM LKVTQHHYSA HFLPPNVHLT  360
DNTRQIIGNP IEPLTEQQLV GMCNLQQSSQ QAEDALSQGL EALQQSLVET LSSNGPGLCT  420
SGNVADYMGQ MSIAMSKLAT LENFLHQADL LRQQTLQQLQ RILTTHQAAR ALLAISDYRA  480
RLRALSSLWL ARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678339316
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077152.10.0transcription factor HBP-1b(c38)-like
SwissprotQ415581e-149HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A4D9A4X80.0A0A4D9A4X8_SALSN; Transcription factor TGA
STRINGEOY021120.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-129bZIP family protein