PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678339297
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 172aa    MW: 19689.1 Da    PI: 8.1448
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678339297genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.94.4e-1378128555
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                +r rr+++NRe+ArrsR RK+  ++eL   v  L ++N+ L ++l++ ++ 
  678339297  78 RRKRRMISNRESARRSRMRKQRHLDELWCQVLRLRTQNHHLLDRLNHVSES 128
                799***************************************999888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-1674138IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.40476139IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-1178151No hitNo description
PfamPF001707.2E-1178130IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.9E-1278127No hitNo description
CDDcd147027.31E-1879130No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MIPLDHQQLG SQTGFLAGTG TGQVQSQAFH LLPSSHILMH QRFLSGMSGF TNTACISSNS  60
SSTSDEAEEQ LLGVIDERRK RRMISNRESA RRSRMRKQRH LDELWCQVLR LRTQNHHLLD  120
RLNHVSESHD KAVQENARLK EETSNLRKMV MDLQIGNTYT ILSDFEDISC NN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19097RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678339297
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077776.12e-59basic leucine zipper 43
SwissprotQ9FMC23e-36BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2G9I8259e-59A0A2G9I825_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000194655e-52(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-42basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]