PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678334050
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 364aa    MW: 40660.6 Da    PI: 9.9935
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678334050genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.62.9e-24134188257
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--S CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHn 57 
                +D+++WrKYGqK+vkg+++prsYY+Ct+++C+++k+ver   d+++ e  Y+g+H+
  678334050 134 HDKHTWRKYGQKQVKGKDHPRSYYKCTYPNCTMRKRVERRV-DGQLEESAYQGKHR 188
                79***************************************.*************7 PP
2WRKY80.22.2e-25277332358
                -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                D++ WrKYGq + k+++++rsYYrCt ++C+++k vers ++p++++++Yeg+H+h
  678334050 277 DKFGWRKYGQNVTKKNPYSRSYYRCTNPKCKARKYVERSIDNPRTFITIYEGKHDH 332
                99*****************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-20127189IPR003657WRKY domain
SuperFamilySSF1182901.7E-19128189IPR003657WRKY domain
PROSITE profilePS5081119.554128192IPR003657WRKY domain
SMARTSM007741.1E-20133191IPR003657WRKY domain
PfamPF031066.4E-18135188IPR003657WRKY domain
PROSITE profilePS5081125.362270335IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.2E-24270333IPR003657WRKY domain
SuperFamilySSF1182904.45E-23271333IPR003657WRKY domain
SMARTSM007748.1E-25275334IPR003657WRKY domain
PfamPF031067.7E-21277332IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEAKATKTVI AKPVACKPSF SVSNISSKHV GSCPENAAAV IKPETVRLKP NCNGPSLPTF  60
KSSFTSNVLY KPVPKLVSTA VNNLNKPREE QGLNPTSHSS HTSRLSNSLG STKMYLDSDK  120
VQTLVYDSKT LVHHDKHTWR KYGQKQVKGK DHPRSYYKCT YPNCTMRKRV ERRVDGQLEE  180
SAYQGKHRRA TQQPLPRRAT ATQDLSLSRS NAQGADDAVV TIHAGSSTSK KYVDLAGESE  240
MEKGDGHGRG ILDDPSNYSE EPKWNPADIS NSVVDGDKFG WRKYGQNVTK KNPYSRSYYR  300
CTNPKCKARK YVERSIDNPR TFITIYEGKH DHGITVKGTN WDLLRDNLPA SDIGSVNEPN  360
PILY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-181353341976Probable WRKY transcription factor 4
2lex_A2e-181353341976Probable WRKY transcription factor 4
Cis-element ? help Back to Top
SourceLink
PlantRegMap678334050
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.13e-47WRKY family protein