PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678328642 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | Dof | ||||||||
Protein Properties | Length: 245aa MW: 26436.4 Da PI: 10.3738 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.5 | 1.4e-38 | 74 | 133 | 4 | 63 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 + lkcprC s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGg++rknk+sss 678328642 74 SPLKCPRCTSPNTKFCYYNNYSLSQPRYFCKNCRRYWTEGGSLRNVPVGGSSRKNKRSSS 133 6789****************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-22 | 62 | 123 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.4E-33 | 75 | 130 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.817 | 76 | 130 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 78 | 114 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MGSGRRELAK APGMASSPSR PRFPCSIPSS LGPRHHGSSA MDSSWWPQGT GAGVVFDQTT 60 AAASEKKPNP PNASPLKCPR CTSPNTKFCY YNNYSLSQPR YFCKNCRRYW TEGGSLRNVP 120 VGGSSRKNKR SSSSSSSSSS SPSASKKPAP DLNPQTLVLK NPKPQNQNVG YNPFHFNNPL 180 PVAATPWELF KSGTFSSTGC DASSHPKGFS TTQNMFDARS GFPFGGNEEE ANGRWNLDGS 240 IKFLV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678328642 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022844511.1 | 3e-41 | dof zinc finger protein DOF4.6-like isoform X2 | ||||
TrEMBL | A0A4D8ZWA9 | 3e-38 | A0A4D8ZWA9_SALSN; Uncharacterized protein | ||||
STRING | Migut.F00184.1.p | 8e-38 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 3e-31 | DOF zinc finger protein 1 |