PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678326734
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WOX
Protein Properties Length: 328aa    MW: 37404.5 Da    PI: 8.7112
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678326734genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.93.1e-2296154356
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
   Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e+
  678326734  96 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQQITAQLrrygKIEGKNVFYWFQNHKARER 154
                7*****************99*************************************98 PP
2Wus_type_Homeobox114.74.4e-3795156364
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                        ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRer k
          678326734  95 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQQITAQLRRYGKIEGKNVFYWFQNHKARERLK 156
                        79**********************************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003893.2E-593160IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.609.1E-996154IPR009057Homeodomain-like
PfamPF000465.1E-2096154IPR001356Homeobox domain
SuperFamilySSF466891.36E-1196158IPR009057Homeodomain-like
CDDcd000865.40E-797154No hitNo description
PROSITE profilePS5007111.11101156IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048513Biological Processanimal organ development
GO:0099402Biological Processplant organ development
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MMWMMEYDGG GGGGELNLIP DPFSGRRALR PLIPASPTLH GADFLALNHH LGKLIQTKAC  60
RRCAVPLTRF MVFHFAAMAE QSKRELMNPQ QVVVSSRWNP TPEQLQTLEE LYRRGTRTPS  120
AEQIQQITAQ LRRYGKIEGK NVFYWFQNHK ARERLKLRRQ LHEQQQQQHY QKLMPQSQKT  180
SPSEKERELV EVEQIKSWAT PTNSSTLAET SQEGAKAADR ERKLQEGWLH FHDNDVQIQQ  240
QQQQMMYLSC SANSTSPCSS AGAVAVLPAK PLDLITILST KELETLELFP LNSGVHTDVE  300
VDGGCERASR PRSHPGPYQF FEFLPLKN
Cis-element ? help Back to Top
SourceLink
PlantRegMap678326734
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9GEN67e-72A0A2G9GEN6_9LAMI; Uncharacterized protein
STRINGXP_006451629.13e-71(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-39WUSCHEL related homeobox 1