PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678321485
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WOX
Protein Properties Length: 324aa    MW: 36305.1 Da    PI: 7.4506
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678321485genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.93e-2270128356
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
   Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e+
  678321485  70 SRWNPTPEQLQALEELYRRgTRTPSAEQIQQITAQLrrfgKIEGKNVFYWFQNHKARER 128
                7*****************99*************************************98 PP
2Wus_type_Homeobox111.44.7e-3669129363
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 
                        ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRer 
          678321485  69 SSRWNPTPEQLQALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERL 129
                        79*********************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003893.3E-567134IPR001356Homeobox domain
PfamPF000465.1E-2070128IPR001356Homeobox domain
SuperFamilySSF466891.1E-1170134IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.1E-970128IPR009057Homeodomain-like
CDDcd000861.25E-671125No hitNo description
PROSITE profilePS5007111.19175130IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MMGYNDCGEV NAAVQDPFTG RRLRPLMPRP PPASPALHGA ADFLALNHHL AIAEHNKLEL  60
VNSQQVVVSS RWNPTPEQLQ ALEELYRRGT RTPSAEQIQQ ITAQLRRFGK IEGKNVFYWF  120
QNHKARERLQ RRRQLHEQQQ QQSHHRNNNK SSDNNNNNSP SEKGAQTGSS RGGGGDALEA  180
EQTKSWASTP PPSLSSTTTS QANATPAKVA EVESKPEEGW MCFEQDDDRE SRRNATWQWE  240
QHMMHFSSPP AVISPPPKTA PPRDFFTIFP HRGGNAAETL ELFPLSSGSQ MDTEACTPAG  300
GETVNRAMNH STPHQFFEFL PLKN
Cis-element ? help Back to Top
SourceLink
PlantRegMap678321485
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084246.12e-81WUSCHEL-related homeobox 1
TrEMBLA0A2G9GEN62e-82A0A2G9GEN6_9LAMI; Uncharacterized protein
STRINGXP_009587628.12e-73(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.12e-32WUSCHEL related homeobox 1