PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678320328
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 567aa    MW: 63430.1 Da    PI: 4.6982
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678320328genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1683.2e-52151412128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                ppGfrFhPtdeelv +yLk+kv  k+++l +vi e+d+yk++P++Lp  +k+k+++++w+fFs+rd+ky++g r+nratk+gyWkatgkd+++ + + ++
  678320328  15 PPGFRFHPTDEELVLYYLKRKVCCKRHRL-DVIGETDVYKWDPEELPgmSKLKTGDRQWFFFSPRDRKYPNGARSNRATKHGYWKATGKDRSISC-GPRN 112
                9*************************999.99***************64489999****************************************.999* PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                vg+kktLvfy+grap+g++tdWvmhey++
  678320328 113 VGIKKTLVFYRGRAPSGVRTDWVMHEYTM 141
                ***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-5813164IPR003441NAC domain
PROSITE profilePS5100555.15614164IPR003441NAC domain
PfamPF023654.3E-2715140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    Send to blast
MNLDSGFLDK GGPFPPGFRF HPTDEELVLY YLKRKVCCKR HRLDVIGETD VYKWDPEELP  60
GMSKLKTGDR QWFFFSPRDR KYPNGARSNR ATKHGYWKAT GKDRSISCGP RNVGIKKTLV  120
FYRGRAPSGV RTDWVMHEYT MDEEELKRCQ TEKEYFALYK VYKKSGPGPK NGEQYGAPFR  180
EDYWDNDELE FRSFVAGDGI KNVQCSSSQD AFAEIVQKLE VEPILSIPQV NNNVGHALAA  240
EEGVQSNLSG HSLQDVSIPA VHEHDPGFDV PACFDIEQIG TNALLLSNAL DVSSVPLLNV  300
QEINPTEDFL EDFLEMNDLM PPCPTSLSTC IPNDELHFDE VDGFNEFDFQ DASSLPFDVG  360
NGESWQMQAN NLDFWAGRIN TIPTLPSVSL DNVNATYTLH QQFSNVNGNN YPLSMEEKGC  420
IPSTEADQDF IHLLNPGIIH ENRTLDFVNH PPTGANEIGS KKQDEDDGTD SWLSTTLWSF  480
VESIPTTPAS ASESLLVNRA LQRMSSFSRL RLNPKSLNVP LPSSPGKGVM MVQSSSFSRM  540
TGIILVVSFV GILCATLWVS AKLVDCH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-481414115140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678320328
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074131.10.0NAC domain-containing protein 17-like
TrEMBLA0A2G9I6C60.0A0A2G9I6C6_9LAMI; Uncharacterized protein
STRINGMigut.N02933.1.p1e-167(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-113NAC domain containing protein 17