PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678318686 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | NAC | ||||||||
Protein Properties | Length: 147aa MW: 15731.5 Da PI: 10.0436 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.3 | 3.4e-11 | 21 | 50 | 1 | 30 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel 30 l+pGfrFhPtdeelv +yLk+kv gk+++ 678318686 21 LAPGFRFHPTDEELVRYYLKRKVCGKDHSK 50 579*********************999554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-10 | 14 | 49 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 9.766 | 21 | 147 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-8 | 23 | 54 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MGISTAAVEK KSRSSVSSSM LAPGFRFHPT DEELVRYYLK RKVCGKDHSK ELDDSSSWSK 60 AKLSGMGKKE DASDGSVAGR SSSKEKKPSD AWGMKPAVAD GWRVGGSSGK KEKPSDAWGS 120 KSDAADCWGP GGSSRKEEKP SDAWKQA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678318686 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 3e-13 | NAC domain containing protein 2 |