PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678309542 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | NAC | ||||||||
Protein Properties | Length: 346aa MW: 39013.9 Da PI: 5.4903 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 113.6 | 2.1e-35 | 16 | 147 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 +G+rF Ptd el+ e L +k+ ++ ++++ i+ v+iy++ P+dL k +k +++ewyf+++r +ky++g r++ra+ +gyWkatg dk+v+++ 678309542 16 KGYRFVPTDVELI-ELLSEKIGEEAaaiPPVNHPdISVVNIYHHRPEDLAgKYHKLGDDEWYFYTPRGRKYKNGVRPSRAAGEGYWKATGADKDVTVEde 114 7************.99*****99997864554556**************9666677999*************************************9977 PP NAM 96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g +k Lvfy+g+++k tdW+mhe+r+ 678309542 115 nsgEKTVIGYRKALVFYTGNDRK---TDWIMHEFRA 147 7666666**********877655...********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.76E-39 | 12 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 39.888 | 14 | 203 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-19 | 16 | 146 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.76E-39 | 191 | 203 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence Send to blast |
MTLKERKPCL DMGYKKGYRF VPTDVELIEL LSEKIGEEAA AIPPVNHPDI SVVNIYHHRP 60 EDLAGKYHKL GDDEWYFYTP RGRKYKNGVR PSRAAGEGYW KATGADKDVT VEDENSGEKT 120 VIGYRKALVF YTGNDRKTDW IMHEFRANAP PRKRLSPDDM VVRHGGFFFR VLDSQMGLSI 180 CMYISTWMLL QLDDYVLCKI YEKKEKKRKK RDEEEEEGVN QHPEACKSDM SAPAPAAAVE 240 GGRGASDCMP DNYATWVDPE TEYDLSNFCN YEKQQQQLQA DAVFLMGNGY STPSDLNFGA 300 DTVSLSSFLS PPGKANMSSF QLHFKSIQEA AGTKDPSPPE PTATVT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-30 | 1 | 209 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-30 | 1 | 209 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-30 | 1 | 209 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-30 | 1 | 209 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-30 | 1 | 209 | 7 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-30 | 1 | 209 | 4 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-30 | 1 | 209 | 4 | 171 | NAC domain-containing protein 19 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 202 | 210 | KKEKKRKKR |
2 | 205 | 209 | KKRKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678309542 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 8e-35 | NAC domain containing protein 47 |