PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678309216

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

Dof

Protein Properties

Length: 274aa MW: 31000.6 Da PI: 8.7863

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678309216	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	83.3	2.6e-26	18	69	4	55
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr 55 + l+cprC s +tkf y+nn++ +qPr++C++C+r Wt GG lrn+PvGg + 678309216 18 DPLRCPRCGSPDTKFRYFNNHNFAQPRHYCRTCKRQWTVGGNLRNIPVGGKM 69 5789*********************************************965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-16	8	67	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-25	19	69	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	23.151	20	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MEQKMVANKS RTPEQDADPL RCPRCGSPDT KFRYFNNHNF AQPRHYCRTC KRQWTVGGNL 60 RNIPVGGKMG NGRPSRASST SRCNYRSRRL TREEQPQNPN HDASPVVTML SQNLNATKLQ 120 PSLSLPAVGS GILSYTLKEE ISFLDAIQSL IEPEINRQCI SKYGDDSSNA VVQRERSIRS 180 MQLQQQGLTQ QIPWQIQYHP TQDPGNNVQA SYSFENTLLQ LSWPSPQSTM EKMSFSSSNS 240 VLWNNIASRT SGEDMNTPAI NVDEWLNLPF DGPY

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678309216

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16144	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	7e-23	DOF zinc finger protein 1