PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678307538
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 426aa    MW: 46646.2 Da    PI: 6.7288
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678307538genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.4e-13348397557
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                +r rr++kNRe+A rsR+RK+a++ eLe +v++L + N+aL+k+ ee+   ++
  678307538 348 RRKRRMIKNRESAARSRARKQAYTLELEAEVAKLREVNQALRKQQEEI---IE 397
                699***************************************665554...44 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-13344409IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.795346395IPR004827Basic-leucine zipper domain
CDDcd147071.59E-25348400No hitNo description
PfamPF001702.7E-11348398IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-12348397No hitNo description
SuperFamilySSF579594.18E-9348396No hitNo description
PROSITE patternPS000360351366IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900057Biological Processpositive regulation of leaf senescence
GO:1903648Biological Processpositive regulation of chlorophyll catabolic process
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MVVKLVKEHA SLSVPCSCLV TVSEVITLVG FYQLVGLLQL EVPSMGPSYI NFRSYSDKSQ  60
PEDGSACNYP LVGQSSVYSL TFDEFQNTLG GSGKDFGSMN MEDFLRSVWT AEENQAVASS  120
SGGAIGSLQR QGSLSLPRTL SQKTVDEVWR EVLKETIAER DGNGSGIGLS FGREPTLGEM  180
TLEAFLMKAG VVREDVQPSG ESNTTGFYAN SFDLGLGFQQ SNQFSEQSNI SFDAPNLGNA  240
VSGHQQQSHH PLHQPQLLLP KQANLVFSAP TKITSNVIQS NGLISGMPNG SNGGIVQRGG  300
AVGAPPQRYL VSDAKAEHSW DTPTVSPSLY HLGESRRSTN PVEKVVERRK RRMIKNRESA  360
ARSRARKQAY TLELEAEVAK LREVNQALRK QQEEIIEKQK NEIQDPMSER GEDKGSHLRR  420
TLTGPW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.
UniProtFunctions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16463099}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678307538
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868}.
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088250.11e-121bZIP transcription factor 23-like
RefseqXP_011088251.11e-121bZIP transcription factor 23-like
RefseqXP_011088252.11e-121bZIP transcription factor 23-like
SwissprotQ9M7Q21e-84AI5L7_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 7
SwissprotQ9M7Q57e-85AI5L4_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLA0A2U9Q8N81e-113A0A2U9Q8N8_SALMI; ABA-responsive element (ABRE)-binding transcription factor1
TrEMBLA0A4D9ASN91e-113A0A4D9ASN9_SALSN; ABA responsive element binding factor
STRINGMigut.B00355.1.p1e-111(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.11e-62abscisic acid responsive element-binding factor 1
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF
    Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions.
    Plant Mol. Biol., 2018. 97(1-2): p. 149-163
    [PMID:29680877]
  3. Muñiz García MN,Cortelezzi JI,Fumagalli M,Capiati DA
    Expression of the Arabidopsis ABF4 gene in potato increases tuber yield, improves tuber quality and enhances salt and drought tolerance.
    Plant Mol. Biol., 2018. 98(1-2): p. 137-152
    [PMID:30143991]