PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678302576
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family WRKY
Protein Properties Length: 274aa    MW: 30384.8 Da    PI: 6.6959
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678302576genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31126184259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs++pr+YYrC+++ gC+++k+ve++++dp+++++tY+geHnh+
  678302576 126 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCTARKQVEKNRSDPRMIIVTYTGEHNHP 184
                69************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-31119186IPR003657WRKY domain
PROSITE profilePS5081135.496120186IPR003657WRKY domain
SuperFamilySSF1182909.02E-27121186IPR003657WRKY domain
SMARTSM007745.5E-37125185IPR003657WRKY domain
PfamPF031062.8E-26127184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MDDDWDLHAV VRGCTAAAAA TPAVAGDRVF NFGDQDFPFA SSPGFQFEDL FDPGSGCCYA  60
EDLHELCKPF LPLSCDAPQK NTPPQLKTQL CRDSDFSSQT PAAPRSKRRK NNCKRECIVS  120
AENLPSDMWS WRKYGQKPIK GSPYPRGYYR CSTSKGCTAR KQVEKNRSDP RMIIVTYTGE  180
HNHPLPTTYQ NLTAGGSIRP NETEVSKSPE QSLSTKISPA LHHSPARECP GDFGDDDDDE  240
FGVPRIGVHD KFFRGSEELT TPNAPSGHEL KLRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-201271871880Disease resistance protein RRS1
5w3x_D3e-201271871880Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678302576
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022871142.13e-68WRKY transcription factor 22-like
TrEMBLA0A142CCY41e-60A0A142CCY4_9LAMI; WRKY transcription factor
STRINGXP_008437986.13e-58(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-48WRKY family protein