PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 678300077 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 24297.6 Da PI: 9.7624 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.3 | 2.2e-09 | 94 | 135 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV+++ +W A I++ +k+++lg+ + eeAa+++++a+ 678300077 94 MRGVYFKN--LKWQAAIKVD-----KKQIHLGTVRSQEEAARLYDRAAF 135 79***966..5********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 7.19E-8 | 93 | 138 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.3E-4 | 93 | 150 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-6 | 100 | 140 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MVSIRRRKLL STCDEQKFFR KESSTEETRS LSLNAPSPCD FKLKEEATSG NGLCSSNVIA 60 SSSSKEKVVQ QVSEVKRRRQ HRLKHIENQE PCIMRGVYFK NLKWQAAIKV DKKQIHLGTV 120 RSQEEAARLY DRAAFMCGRE PNFQLSKEEK QELSKFSWDE FLAMTRLAIS SKRSQRRRVK 180 KLNDSNWEGN KENDACLSPS DDEANDMVAA C |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 678300077 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011089068.1 | 9e-73 | ethylene-responsive transcription factor-like protein At4g13040 isoform X1 | ||||
Refseq | XP_011089071.1 | 9e-73 | ethylene-responsive transcription factor-like protein At4g13040 isoform X2 | ||||
Refseq | XP_011089072.1 | 9e-73 | ethylene-responsive transcription factor-like protein At4g13040 isoform X2 | ||||
TrEMBL | A0A4D8ZWT0 | 1e-63 | A0A4D8ZWT0_SALSN; Uncharacterized protein | ||||
STRING | EOX93857 | 4e-61 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6246 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 1e-42 | ERF family protein |