PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34396-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 266aa    MW: 29215.9 Da    PI: 9.3044
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34396-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.63.8e-21121182259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                      +Dg++WrKYG K++ ++ fprsYYrC ++   +Cp+kk v+++ ++dp v+ +t  ++H+++
  TRIUR3_34396-P1 121 NDGFHWRKYGEKKILNAVFPRSYYRCGYSdehRCPAKKLVQQQnNNDPPVFMVTLINDHTCS 182
                      7**************************998889*******8761679*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-21116182IPR003657WRKY domain
SuperFamilySSF1182901.05E-20116182IPR003657WRKY domain
SMARTSM007744.8E-30120183IPR003657WRKY domain
PROSITE profilePS5081115.158121179IPR003657WRKY domain
PfamPF031061.4E-22121181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
RPKSEMSPPP SDQRGAVIEE LRKGAQLADR LRQQLELIPE LGRRSAALAS VSNISTALVS  60
SASMLESNRE HAYAAGASGN GGGIGARNGA IARTRKAKHR RGPHGEELPI KGRILTETPE  120
NDGFHWRKYG EKKILNAVFP RSYYRCGYSD EHRCPAKKLV QQQNNNDPPV FMVTLINDHT  180
CSSLFPANDQ PPSSSNSATA NSQVLDFTKA SLSSAVGLSR LKKEEDAGMS VTVPSYTYEE  240
LASYSSLPLL SPKEWEMEME IKSLFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177383.11e-151WRKY transcription factor 55-like
TrEMBLT1NU760.0T1NU76_TRIUA; Uncharacterized protein
STRINGTRIUR3_34396-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.14e-18WRKY DNA-binding protein 55