PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32789-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 167aa    MW: 18803.6 Da    PI: 6.525
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32789-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.6e-092483463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                      +  +rk +NR++A+rsR +++++ e+L  ++++Le  N a++ +    +++++ +++++
  TRIUR3_32789-P1 24 ERQRKRKTSNRLSAQRSRIKRQQREENLVVRAAQLEIDNNAMRVTTALVQQQCSLVEQQN 83
                     4567999*********************************************99888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.1E-82185IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-102182No hitNo description
PROSITE profilePS502179.682386IPR004827Basic-leucine zipper domain
PfamPF001705.3E-72383IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.01E-72580No hitNo description
CDDcd147022.27E-122677No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MEMIPPAAAS SAPPRHGGAV TEEERQRKRK TSNRLSAQRS RIKRQQREEN LVVRAAQLEI  60
DNNAMRVTTA LVQQQCSLVE QQNRVLFADA RCLYSLLQQQ NSQLRMLGQI TGVPMDVQEI  120
PVHLTQLYGG LQTPPAPPLP LPPEIQMMFQ PEQLDDIMDD AGSLPWL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12530QRKRKT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2508081e-135AK250808.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf88n03, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164955.13e-90ocs element-binding factor 1-like
TrEMBLM8AQ871e-117M8AQ87_TRIUA; Ocs element-binding factor 1
STRINGTRIUR3_32789-P11e-118(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125042837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.15e-08basic region/leucine zipper motif 53