PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31607-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 636aa    MW: 68794 Da    PI: 6.4357
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31607-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.4e-31316372259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dgy+WrKYGqK+vk se+prsYY+Ct+++C+vkkkvers+ +++v+ei+Y+g+Hnh+
  TRIUR3_31607-P1 316 EDGYSWRKYGQKQVKHSEYPRSYYKCTHPSCQVKKKVERSH-EGHVTEIIYKGTHNHP 372
                      8****************************************.***************8 PP
2WRKY104.94.3e-33544602159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe
  TRIUR3_31607-P1 544 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERASHDLKSVITTYEGKHNHE 602
                      59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-27310374IPR003657WRKY domain
SuperFamilySSF1182903.4E-25310374IPR003657WRKY domain
PROSITE profilePS5081122.63310374IPR003657WRKY domain
SMARTSM007743.1E-33315373IPR003657WRKY domain
PfamPF031061.4E-23316372IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.5E-36529602IPR003657WRKY domain
SuperFamilySSF1182903.53E-28536602IPR003657WRKY domain
PROSITE profilePS5081135.68539604IPR003657WRKY domain
SMARTSM007744.4E-38544603IPR003657WRKY domain
PfamPF031062.5E-25545602IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009942Biological Processlongitudinal axis specification
GO:0030010Biological Processestablishment of cell polarity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    Send to blast
MASSFAVLGV NKMEQPLPTF YFRLLFRFHA EMDGHTHLAM EWKDQSPGAD CSMLPSFLTD  60
PFPADPLVED CDGGNDGSEG AGSSSSSSLS ERMQARAGFS VAKLSMPGSE YSGAQSPYLT  120
IPPGLSPASL LESPVFLSNA MLQTVGIVIG FVSAMLDWQG QSSPTTGKLL MLGDTNSNNN  180
TRLEPPSIED RPGAFSFKPL DLKSSQYTAE GKKGSLPNSQ HPSAPSRDVP VKTETNIQTT  240
TRGAIPPGHL NQAQFNNGQD LMKCSYHDCN NKRNRLAADS TTAGGDNNDG PPATAADSEA  300
AKGDYPAAVA TAAPAEDGYS WRKYGQKQVK HSEYPRSYYK CTHPSCQVKK KVERSHEGHV  360
TEIIYKGTHN HPRPAAQGRR PAGGAQVHPF NDAQMDAPAD NNNNGYGNAG GSQPNAEARS  420
LWHAGVAVQD WRGDGLEATS SPSVPGELCD SSASMQVHDG AARFESPEGG VDVTSAVSDE  480
VDGDDRVAHG SMSQGQGAAD TTEGDELESK RRKLESCAID MSTASRAVRE PRVVIQTTSE  540
VDILDDGYRW RKYGQKVVKG NPNPRSYYKC THPGCSVRKH VERASHDLKS VITTYEGKHN  600
HENRKEYKRM PHPLGEDYNL QNILLKQPEQ IISKQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-35316602878Probable WRKY transcription factor 4
2lex_A7e-35316602878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00071PBMTransfer from AT5G56270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3767650.0AK376765.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3135C08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189258.10.0probable WRKY transcription factor 34
TrEMBLM8A4980.0M8A498_TRIUA; Putative WRKY transcription factor 2
STRINGTRIUR3_31607-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-101WRKY DNA-binding protein 2