PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_30118-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 559aa    MW: 59843 Da    PI: 5.3366
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_30118-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox25.71.9e-084885261854
                      HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
         Homeobox  18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                      +Fe+   +yp+ +e+  LA++ gL+ +qV++WF N R +
  TRIUR3_30118-P1 488 MFENflRPYPKDHEKDMLAARSGLSRSQVSNWFINARVR 526
                      57766689*****************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007111.758467530IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.1E-25469542IPR009057Homeodomain-like
SuperFamilySSF466891.45E-15470539IPR009057Homeodomain-like
SMARTSM003893.2E-7470534IPR001356Homeobox domain
CDDcd000861.43E-11470531No hitNo description
PfamPF059201.3E-15487526IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008285Biological Processnegative regulation of cell proliferation
GO:0009640Biological Processphotomorphogenesis
GO:0010227Biological Processfloral organ abscission
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010371Biological Processregulation of gibberellin biosynthetic process
GO:0090470Biological Processshoot organ boundary specification
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MATDLEKEQP RYGVESARNV KLEEHTRGTH VVELTSGLLD EDEIVMNSAS RDEGVVVGGH  60
HGVKARGEAE RQDLGEKLCK EVTGCEFEAL VQTAEGIGIR GLVVPCLRRH LLKAIELQPK  120
AFELGLDAMN TCFFGGSSMI GSEAPFFYPG MPHDAGFGSG GADVAAHFMA SSAMVTSPAN  180
QLVWPAAAPS QDSHQASMST EEMNDDAYAV AGESCSTVHS MLPSASADFF QYGSGVVTIA  240
QPSKMAKLVA GEPHCGWLYD GPSAASTHQP YYLTAFSGGS DFPDAVAGAA SGLSLRLGAQ  300
SSSVTMASMP EQSSEVSCSG LTHVNSEGFG YQQPQAVRAH AGAGAGLFHL PPYGDVGAGD  360
DELRHVYPQM YSRRPHFSQV LPRSGYAHIA QELLNGFAGC VLKDLAEMPD DSVSGIGSEA  420
SLLLSSSCSA RTPSSVSSNQ LMLPSDEGSA DGGRWMEAQR RLRRGAQQSW RPQRGLPEKS  480
VAVLKAWMFE NFLRPYPKDH EKDMLAARSG LSRSQVSNWF INARVRLWKP MIEEMYEELK  540
RSSGRGGDAE LPSSKDVVG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB5466440.0AB546644.1 Triticum aestivum WBLH2-1 mRNA for BEL1-type homeodomain protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196798.10.0BEL1-like homeodomain protein 2
TrEMBLM8B1E80.0M8B1E8_TRIUA; Homeobox protein ATH1
STRINGTRIUR3_30118-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31433365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32980.11e-38homeobox gene 1