PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_29978-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 196aa    MW: 21726 Da    PI: 8.0882
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_29978-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-30108166159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDg++WrKYG+K vk+s++pr+YYrC+ +gC vkk+ver+++dp++v++tY g Hnh 
  TRIUR3_29978-P1 108 LDDGFKWRKYGKKAVKNSPNPRNYYRCSAEGCGVKKRVERDRDDPRYVVTTYDGVHNHA 166
                      59********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-3296168IPR003657WRKY domain
SuperFamilySSF1182909.42E-28100168IPR003657WRKY domain
PROSITE profilePS5081131.582103168IPR003657WRKY domain
SMARTSM007747.6E-35108167IPR003657WRKY domain
PfamPF031064.2E-24109165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MAASLGLNPE GVFSSAYAYS SPFLADYYAP PPRAVIDDSD YAAQLHLHDD HQHHPFDQFE  60
HSPPTPTAQI SFAGAGDDEH RGEKKIKISA RVSAGRIGFR TRSEVEILDD GFKWRKYGKK  120
AVKNSPNPRN YYRCSAEGCG VKKRVERDRD DPRYVVTTYD GVHNHATPGA AAQYYCYSPP  180
RSSPPAAYSA AGLLQF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-2893168277Probable WRKY transcription factor 4
2lex_A6e-2893168277Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3571960.0AK357196.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1048A03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169646.11e-120probable WRKY transcription factor 24
TrEMBLM7YJE01e-143M7YJE0_TRIUA; Putative WRKY transcription factor 50
STRINGTRIUR3_29978-P11e-143(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.11e-41WRKY DNA-binding protein 50